PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN27996.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 456aa    MW: 50255.3 Da    PI: 6.7332
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN27996.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.76.6e-063473851154
                 HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  KHN27996.1 347 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 385
                 5778999**********998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.576336385IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.31E-7346389No hitNo description
SuperFamilySSF474591.83E-11346401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0025347391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.8E-10350393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MADDDQFQAS GNWWETSRSV RYESGASQSS SSAITNTGNN FGWQGSDMAD MKPRSSMDSS  60
SVVFHDTQNN KLQQPDSATS SDPNLHMMGL GLSSQAMDWN RASLLRGEKG TENSFRSMLQ  120
ENLSSSRTNF QHETGNMELS QQVQWRSEKI FSSESSTNEF KQVNRGGGFS LDQSQFSPQY  180
SSGDSTVTSQ GLPSSNFQID SSALYGTSSI LQGLLGPDHN NQTQQQPMSF PYHTTSYGLN  240
SNELVPSWSK VPQFLRASPP KPPPNNQLHF TNPATFWNAS EAANIKDVRP SFFPSLQPPF  300
STPNFEVQSK NISEVRESGT VVKKSGNEPA PKRTRNETPS PLPAFKVRKE KMGDRITALQ  360
QLVSPFGKTD TASVLSEAIE YIKFLHEQVT ALSTPYMKSG APIQIQQNSG KSKEAEGPKQ  420
DLRSRGLCLV PVSSTFPVTH ETTVDFWTPT FGGTPR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150401e-178AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006592891.10.0PREDICTED: transcription factor bHLH123-like isoform X1
SwissprotQ8GXT35e-88BH123_ARATH; Transcription factor bHLH123
TrEMBLA0A0B2R1V00.0A0A0B2R1V0_GLYSO; Transcription factor bHLH123
TrEMBLI1LUT60.0I1LUT6_SOYBN; Uncharacterized protein
STRINGGLYMA12G34490.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.19e-79bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]